Unfortunately you need to talk to BAMA again. I have never had an issue with any of my tunes like you are having. Only issue is when they make mistake on not turning off my rear 02 sensors. And one time there was an issue with my speedometer reading incorrectly due to tire size or rear end ratio indicated in the tune.
Make sure they know all your modifications. If you have an aftermarket CAI that requires a tune then don't start the car with stock tune in it.
2013 GT, Track Pack
, Recaros, Kooks Axlebacks, Airaid CAI, BMR Rear Adj. LCAs, BMR Relocation Brackets
, JLT Oil Separator(s), Barton 2 Post Shifter Bracket
, Steeda Motor Mounts
, Barton Shifter
, JHR Clutch line, BMR adj. UCA and Mount, Kooks 1 3/4 headers/catted H, DSS Al Shaft
, BMR Loop
, Vogtland Sport Springs front/BMR rear, Strange Adj. Struts/Shocks, Extended ball joints, Steeda Bumpsteer Kit, Whiteline Tranny Mount Bushing, Borla Overaxles, BMR Watts, Vorshlag 3" Ducts