I have a 2002 Gt with a 5 speed Tremec 3650. It began to have first to second shift issues and I replaced it with a rebuilt unit. I replaced the clutch, pressure plate, etc. and had the flywheel machined to clean it up. For the first 3 weeks it shifted perfectly and I was very satisfied but it recently started to clunk going into fourth gear and sometimes even grinds just a little. When shifting down from fifth to fourth it grinds every time now. I was told that it is possibly a clutch adjustment issue and not a problem with the transmission. Any suggestions?