Did you use a factory manual trans harness? I think the pins may be the same and the auto neutral safety switch circuit may be jumpered in the manual harness.
It should be fine to drive. The idle speed and possibly timing should be the only differences. Some time ago reading of several people who swapped on 94 & 95 who used the auto EEC, they said there was some sort of stutter when the car thought it was going to be going into overdrive.
It should be fine to drive. The idle speed and possibly timing should be the only differences. Some time ago reading of several people who swapped on 94 & 95 who used the auto EEC, they said there was some sort of stutter when the car thought it was going to be going into overdrive.