I know this will sound strange, but is your neutral switch on the top cover of your T-5 connected? It shorts when the car is in neutral and is open when the car is in gear. The Engine Computer controls the idle-down process in a way that simulates the old "dashpot" the classic cars had in the throttle linkage. I believe that if it thinks the car is in gear it will not perform the dashpot function and the car may idle down too fast and die.
There may be a better explanation than this for what I'm saying. I'm a transmission guy and not an ECM specialist!